Research articles
[1] Jia YY, Kurdian A, Atwood SX: Benchmarking Human Skin Organotypic Cultures Toward High-Fidelity Excellence. 2025. (in preparation)
[2] Zhang J, Pan TY, Kley AL, Rajmalani BA, Williams JB, Lefevre MA, Fu X, Zhan Q, Deng L, Jia YY, Deans K, Yan Y, Zhai Y, Erdogan Q, Atwood SX, Clark RA, Kupper TS, Chiu IM: CGRP-Ramp1 Signaling Tunes Memory CD8 T Cell Response through Langerhans Cells. 2025. (submitted to Cell)
[3] Jia YY, Bajsert J, Perez-Aso M, Atwood SX: Enhanced Differentiation Potential of Pigmented Human Epidermal Equivalents. bioRxiv 2025, doi:10.1101/2025.05.29.656859.
[4] Cheng B, Peng SI, Jia YY, Tong E, Atwood SX, Sun BK: Comprehensive secretome profiling and CRISPR screen identifies SFRP1 as a key inhibitor of epidermal progenitor proliferation. Cell Death Dis 2025, 16:1–16.
[5] Scipioni L, Tedeschi G, Navarro M, Jia Y, Atwood S, Prescher JA, Digman M: ESPRESSO: Spatiotemporal omics based on organelle phenotyping. Nature Methods 2025. (in press)
[6] Sun P, Kraus CN, Zhao W, Xu J, Suh S, Nguyen Q, Jia Y, Nair A, Oakes M, Tinoco R, et al.: Single-cell and spatial transcriptomics of vulvar lichen sclerosus reveal multi-compartmental alterations in gene expression and signaling cross-talk. bioRxiv 2024, doi:10.1101/2024.08.14.607986.
[7] Sleiman NH, Carnesecchi J, Jia Y, Delolme F, Gilquin L, Gouet P, Merabet S: An improved nanobody-based approach to capture and visualize specific interaction networks of binary protein complexes in living cells. bioRxiv 2024, doi:10.1101/2024.09.12.612471.
[8] Bocci F, Jia Y, Atwood S, Nie Q: Multiscale cell-cell communication networks of single cells. 2024. (submitted to Nature Methods)
[9] Veniaminova NA*, Jia YY*, Hartigan AM, Huyge TJ, Tsai S-Y, Grachtchouk M, Nakagawa S, Dlugosz AA, Atwood SX, Wong SY: Distinct mechanisms for sebaceous gland self-renewal and regeneration provide durability in response to injury. Cell Rep 2023, 42:113121.
[10] Stabell AR, Lee GE, Jia Y, Wong KN, Wang S, Ling J, Nguyen SD, Sen GL, Nie Q, Atwood SX: Single-cell transcriptomics of human-skin-equivalent organoids. Cell Rep 2023, 42:112511.
[11] Jia Y, Reboulet J, Gillet B, Hughes S, Forcet C, Tribollet V, Hajj Sleiman N, Kundlacz C, Vanacker J-M, Bleicher F, et al.: A Live Cell Protein Complementation Assay for ORFeome-Wide Probing of Human HOX Interactomes. Cells 2023, 12:200.
[12] Dard A*, Jia Y*, Reboulet J*, Bleicher F*, Lavau C, Merabet S: The human HOXA9 protein uses paralog-specific residues of the homeodomain to interact with TALE-class cofactors. Sci Rep 2019, 9:5664.
[13] Dard A*, Reboulet J*, Jia Y*, Bleicher F*, Duffraisse M, Vanaker J-M, Forcet C, Merabet S: Human HOX Proteins Use Diverse and Context-Dependent Motifs to Interact with TALE Class Cofactors. Cell Rep 2018, 22:3058–3071.
* Equal contribution
Reviews
[14] Jia YY, Atwood SX: Diversity of human skin three-dimensional organotypic cultures. Curr Opin Genet Dev 2024, 89:102275.
[15] Jia Y, Bleicher F, Merabet S: A systematic survey of HOX and TALE expression profiling in human cancers. Int J Dev Biol 2018, 62:865–876.
Book chapter
[16] Jia Y, Bleicher F, Reboulet J, Merabet S: Bimolecular Fluorescence Complementation (BiFC) and Multiplexed Imaging of Protein-Protein Interactions in Human Living Cells. Methods Mol Biol Clifton NJ 2021, 2350:173–190